Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814238.1_cds_XP_016497856.1_11944
CDS Infomation

[gene=LOC107816639] [db_xref=GeneID:107816639] [protein=armadillo repeat-containing protein LFR-like] [protein_id=XP_016497856.1] [location=join(10624..10810,13711..13880,13987..14129,14255..14511,15382..15487,15564..15702,15801..15928,16011..16266)] [gbkey=CDS]
Sequence

ATGCAGAAAAGAGAGCAAGCGAAGCTAAGCGGATCAACGGGTGGCTCCGCCGCACCGCCG
GCGAAAAGGGGGCGGCCATTGGGAAGCGTAAACAGCAACGCAGCCGCAGCAGCAGCTGCA
GCAGCTGACTCAGCAGCTCCTTCAACTCTCCTCGGCCCGTCCCTGCAAGTTCACTCTGCC
TTCGCTGAACAGAATAATAAAAGGATTGTTCTAGCTCTTCAAAGTGGATTAAAGGGTGAG
CTGACATGGGCACTAAATACGCTCACTTTGCTATCATTCAAGGAGAAAGATGACATCCGT
AAGGATGCAACTCCTCTTGCCAAAATTCCTGGATTGCTTGATGCTCTACTTCAAGTTATA
GATGATTGGCGTGATATAGCGTTGCCAAGGGTACTTGTAAAGGCACCTCGTGTGCGGCTT
TTGGGTGCACATTCAGCTGTTACTGGATTTGGAATTGGATATGAAGCATTGAACTCGAAT
GAATCTGTACCTAATCCTAGCACTGGTTCTGGAGCTGCCAACAGAGATTCATCTGTTCAG
AAGAGTAATACCAAGTCTCGCCCTGCGGGTTGGTGGTTTGAGGAAGATGGCTTATTTAAT
TTGGATGAGGAGGGGCGATCTGAAAAGCAGCAGTGCGCCGTTGCTGCTTCAAACATTCTC
CGCAACTTCTCTTTTATGCCAGATAATGAAGTCATCATGGGCCAGCATAGACATTGCTTA
GAAACTCTATTCCAATGTCTGGCAGATTATGTTACAGAGGATGAAGAACTTGTCACAAAT
GCCCTCGAGACGATAGTGAATATAGGTCCATTGATAGATCTCCGAATCTTCAGTTCCTCG
AAACCTTCTTTTATCAAAATGACGGAGAAACGTGCTGTCCAGGCTGTCATGGGAGTGTTG
GGATCTGCTGTCAAGGCCTGGCATTGTGCTGCTGCTGAATTAATTGGTCGTATTATAATA
AATCCTGATAATGAACCTTTCCTACTTCCTTCTGCTTCGCAGATATATAAACGTTTAGTT
GATATCATGAGCCAACCAGCTACTGATGCTCAAGCAGCTGCAATTGGTGCATTATATAAC
CTTGCCGAAATAAATATGGACTGCCGTTTGAAGCTGGCTAGTGAACGATGGGCTATTGAT
AGACTGTTGAAAGTGATTAAGATGCCACATCCAGTACCAGAAGTGTGCAGGAAAGCAGCA
ACTATTTTAGAAAACCTTGTATCAGAGCCACAGAACAAGCCTCTTCTACTAGTGTATGAA
AATGCATTTGCGGAGATGCTTTTTGGTGACCCAAGATACTCGGACATATTTTCCAGAATA
CTATACGAACTAACATCACGGCCAAGCAACAAAGTGGCATCAGCTCGAGGGATCTGGGGC
ATGTAA

Peptide Sequence

PEP ID

XP_016497856.1
PEP Infomation

PREDICTED: armadillo repeat-containing protein LFR-like [Nicotiana tabacum]
Sequence

MQKREQAKLSGSTGGSAAPPAKRGRPLGSVNSNAAAAAAAAADSAAPSTLLGPSLQVHSA
FAEQNNKRIVLALQSGLKGELTWALNTLTLLSFKEKDDIRKDATPLAKIPGLLDALLQVI
DDWRDIALPRVLVKAPRVRLLGAHSAVTGFGIGYEALNSNESVPNPSTGSGAANRDSSVQ
KSNTKSRPAGWWFEEDGLFNLDEEGRSEKQQCAVAASNILRNFSFMPDNEVIMGQHRHCL
ETLFQCLADYVTEDEELVTNALETIVNIGPLIDLRIFSSSKPSFIKMTEKRAVQAVMGVL
GSAVKAWHCAAAELIGRIIINPDNEPFLLPSASQIYKRLVDIMSQPATDAQAAAIGALYN
LAEINMDCRLKLASERWAIDRLLKVIKMPHPVPEVCRKAATILENLVSEPQNKPLLLVYE
NAFAEMLFGDPRYSDIFSRILYELTSRPSNKVASARGIWGM

Transcript Sequence

Gene sequence data has not been registered.